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allow running in isaac singularity container

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This commit is contained in:
Dominik Moritz Roth 2024-06-24 18:23:20 +02:00
parent ea3d3b4b82
commit 1830c36fd8
1 changed files with 5 additions and 3 deletions
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8
slate/slate.py
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@ -225,10 +225,12 @@ class Slate():
sh_lines += self.consume(slurmC, 'sh_lines', [])
if venv := self.consume(slurmC, 'venv', False):
sh_lines += [f'source activate {venv}']
final_line = f'python3 {python_script} {filename} {name} -t $SLURM_ARRAY_TASK_ID --sweep_id {self.sweep_id}'
if self.consume(slurmC, 'xvfb', False):
sh_lines += [f'xvfb-run python3 {python_script} {filename} {name} -t $SLURM_ARRAY_TASK_ID --sweep_id {self.sweep_id}']
else:
sh_lines += [f'python3 {python_script} {filename} {name} -t $SLURM_ARRAY_TASK_ID --sweep_id {self.sweep_id}']
final_line = f'xvfb-run {final_line}'
if self.consume(slurmC, 'isaac_sif', False):
final_line = f'./omni_sif_python {final_line}'
sh_lines += [final_line]
script = "\n".join(sh_lines)
num_jobs = self._calc_num_jobs(schedC, num_conv_versions)