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fix: invalid batch file

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This commit is contained in:
Dominik Moritz Roth 2023-07-07 12:32:12 +02:00
parent d4fb8858d8
commit a663d7e9d4
1 changed files with 2 additions and 1 deletions
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3
slate/slate.py
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@ -147,7 +147,8 @@ class Slate():
s_name = self.consume(slurmC, 'name') s_name = self.consume(slurmC, 'name')
python_script = 'main.py' python_script = 'main.py'
sh_lines = self.consume(slurmC, 'sh_lines', []) sh_lines = ['#!/bin/bash']
sh_lines += self.consume(slurmC, 'sh_lines', [])
if venv := self.consume(slurmC, 'venv', False): if venv := self.consume(slurmC, 'venv', False):
sh_lines += [f'source activate {venv}'] sh_lines += [f'source activate {venv}']
sh_lines += [f'python3 {python_script} {filename} {name} -j $SLURM_ARRAY_TASK_ID'] sh_lines += [f'python3 {python_script} {filename} {name} -j $SLURM_ARRAY_TASK_ID']